All Papers
Author: R. Larrosa

2024

Advancements in Long-Read Genome Sequencing Technologies and Algorithms [doi]
E. Espinosa, R. Bautista, R. Larrosa, O. Plata
Genomics, 116 (3), May 2024, 110842

2023

Comparing Assembly Strategies for Third-Generation Sequencing Technologies Across Different Genomes [doi]
E. Espinosa, R. Bautista, I. Fernandez, R. Larrosa, E.L. Zapata, O. Plata
Genomics, 115 (5), September 2023, 110700

2022

Whole-Genome Assembly: An Experimental Study of Computational Costs and Architectural Opportunities [link]
E. Espinosa, I. Fernandez, R. Larrosa, O. Plata
XXXII Jornadas de Paralelismo (JP'22) (parte de las Jornadas Sarteco), Alicante (Spain), September 2022

Whole-Genome Assembly: An Experimental Study of Computational Costs and Architectural Opportunities [link]
E. Espinosa, I. Fernandez, R. Larrosa, O. Plata
Workshop on Accelerator Architecture in Computational Biology and Bioinformatics (AACBB'22) (co-located with HPCA'22), New York (NY, USA), June 2022

2021

Enabling Fast and Energy Efficient FM-index Exact Matching using PNM [link]
J.M. Herruzo, I. Fernandez, E. Espinosa, S. Gonzalez-Navarro, R. Larrosa, O. Plata
XXXI Jornadas de Paralelismo (JP'20/21) (parte de las Jornadas Sarteco), Malaga (Spain), September 2021

2020

Expression-Based, Consistent Biomarkers for Prognosis and Diagnosis in Lung Cancer [doi]
M. Arroyo, R. Larrosa, J. Gomez-Maldonado, M.A. Cobo, M.G. Claros, R. Bautista
Clinical and Translational Oncology, 22, October 2020, pp. 1867-1874

Micro-Variations from RNA-seq Experiments for Non-model Organisms [doi]
E. Espinosa, M. Arroyo, R. Larrosa, M. Manchado, M.G. Claros, R. Bautista
8th International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO'20), Granada (Spain), May 2020
(Springer, LNCS 12108, I. Rojas, O. Valenzuela, F. Rojas, L.J. Herrera and F. Ortuño, Eds., pp. 542-549)

2019

Biomarker Potential of Repetitive-Element Transcriptome in Lung Cancer [doi]
M. Arroyo, R. Bautista, R. Larrosa, M.A. Cobo, M.G. Claros
PeerJ, 7, December 2019, e8277

2018

2017

2016

2015

2014

2013

FQbin: A Compatible and Optimized Format for Storing and Managing Sequence Data [link]
D. Guerrero-Fernandez, R. Larrosa, M. Gonzalo-Claros
International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO'13), Granada (Spain), March 2013

2012

Global DAta Re-Allocation via Communication Aggregation in Chapel [doi]
A. Sanz, R. Asenjo, J. Lopez, R. Larrosa, A. Navarro, V. Litvinov, S-E. Choi, B.L. Chamberlain
IEEE 24th International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD’12), New York (NY), USA, October 2012

2011

A First Implementation of Parallel IO in Chapel for Block Data Distribution [doi]
R. Larrosa, R. Asenjo, A. Navarro, B.L. Chamberlain
International Conference on Parallel Computing (ParCo’2011), Ghent (Belgium), August-September 2011
(Advances in Parallel Computing, Vol. 22: Applications, Tools and Techniques on the Road to Exascale Computing, IOS Press, pp. 447-454, 2012)

2010

Implementing a Chapel Library for Parallel IO [link]
R. Larrosa, A. Navarro, R. Asenjo, E.L. Zapata
XXI Jornadas de Paralelismo (JJPP'10) (parte de CEDI 2010), Valencia (Spain), September 2010

2009

2008

2007

2006

2005

2004

2003

2002

2001

2000

Tarsys: A System for Video Archive Management [doi]
R. Larrosa, G.P. Trabado, E.L. Zapata
IST/SPIE's International Symposium on Internet Multimedia Management Systems (Information Technologies 2000), Boston (MA, USA), November 2000

1999

1998

1997

1996

1995

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1981